Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947836.1_cds_XP_016489357.1_79887
CDS Infomation

[gene=LOC107809267] [db_xref=GeneID:107809267] [protein=IQ domain-containing protein IQM2-like] [protein_id=XP_016489357.1] [location=complement(join(8398..9057,9144..9245,9340..9579,9689..9779,9865..9953,10046..10111,10202..10316,10408..10790))] [gbkey=CDS]
Sequence

ATGGGGATATCGTTTTCGTGCCCATTTTCTTCACATAGTGATTTGGAAAACAGTCTTGAA
TCTATTATTGTGAAGTCTATTAACTTTGGTGATAATGAACAGAAGACACTGTTACATTCC
ATTAGTTTCAAAAGCCAAGATTCTGAACCCATTGTAATGCAATCAGATGGTTCAGGAAAT
ATGTTGATAGAAAAATCAGTCAGTTTTAAGACAAAGGAAAATGCAATGGACACGTTTAGC
ACGAACGAAGACACTCTGAAATCGCCTTTGGTATATAGTAGCAGCCCAAAACATGAGGCA
GCTGTGAAATTGCAGAAAGTGTACAAGAGTTTTCGGACTAGACGAAAATTAGCAGATTGT
GCAGTACTCATTGAGCAAAGTTGGTGGAAACTATTAGATTTTGCAGAACTTAAACATAGT
TCAATTTCATTTTTTGATCTTGAGAAACACGAGACTGCGATTTCGCGCTGGTCAAGAGCA
AGAACTAGAGCTGCCAAGGTAGGCAAAGGCTTATCTAAGAATGGCAAAGCGCAGAAACTT
GCTTTACAACATTGGCTTGAAGCTATCGATCCAAGACATCGTTATGGACACAACTTGCAT
TTCTATTATGTTCAATGGTTGCATTCTCAGAGTAAAGAGCCCTTCTTCTACTGGTTGGAT
ATAGGAGAAGGCAAAGAAGTGAATCTTGTTGACAAATGCCCGCGATCGAAACTTCAGCAG
CAATGCATCAAGTACCTTGGTCCGATGGAAAGAAAGGCTTATGAAGTTGTAGTGGAAGAT
GGGAAGCTCTTGTACAAAGAAACAGGAAAGCTACTTGACACAACTGGTGAACCAAAAGGT
GCTAAGTGGATATTTGTTCTCAGCACATCTAAAAACTTATATGTTGGGAAGAAAAAGAAA
GGATCATTTCAGCATTCAAGTTTCTTGGCCGGGGGCGCCACATTAGCTGCTGGTCGAATA
GTTGTGGAACAAGGAGAATTGAAGGCTGTCTGGCCTCATAGTGGACATTATCGACCTACT
CCAGAAAACTTTCAAGACTTGATTTCGTTTCTAAGGGAGAACGACGTGGACCTTAATGAT
GTTAAGCTTGATTCTGTCGATGATGAAGATGATTCAATGGGCAAGAAGAAGGGCGTATAC
TTCAGAGATAACGCCTCTGATGATGAAATAGCTCAAAAAGATGGTCCAGAGATTGCATCA
GAAGACTCAACTTCAGAGAAAAATGAGTTAAAAGAACAAGCGACGATGCCTGCTGCTTCA
CCACATAACAAGTTAAGATCATCTCATAGCTTCAGTAACAGATTGGCTAATCTAAAAATA
CCTAGCCACGACGATTTACTAGAGAGTTTAAAGAATGACAATGAAGCTGTTAAACTAGAA
TCACCAACAGATGGATATGAATCAGCAGAGGAACAAGAAAGTAAAGAAGAGACAATTGCA
CAAGAATGTATACTCCAGAGGATAAATTCACACAAAGAAATGAAGTCATTTCAATTGGGA
AAGCAATTGTCTTGTAAATGGAGTACTGGAGCTGGACCGCGAATCGGATGCTTGAGAGAT
TACCCTTCACAGCTACAATCTCATGCATTAGAAGAAGTGAACTTGTCCCCTAGAAGTGCA
CGCCGTCTCAATTTTTATTCGAGGCCATCAACACCGACGAGCTTTAGTAGAGAAATGCAA
GAGCCTTTTCTGCATTCGCCTCATGACTCAAGAAGACATTCCTCTCCATTTTGTAAAGGA
CTTTAA

Peptide Sequence

PEP ID

XP_016489357.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM2-like [Nicotiana tabacum]
Sequence

MGISFSCPFSSHSDLENSLESIIVKSINFGDNEQKTLLHSISFKSQDSEPIVMQSDGSGN
MLIEKSVSFKTKENAMDTFSTNEDTLKSPLVYSSSPKHEAAVKLQKVYKSFRTRRKLADC
AVLIEQSWWKLLDFAELKHSSISFFDLEKHETAISRWSRARTRAAKVGKGLSKNGKAQKL
ALQHWLEAIDPRHRYGHNLHFYYVQWLHSQSKEPFFYWLDIGEGKEVNLVDKCPRSKLQQ
QCIKYLGPMERKAYEVVVEDGKLLYKETGKLLDTTGEPKGAKWIFVLSTSKNLYVGKKKK
GSFQHSSFLAGGATLAAGRIVVEQGELKAVWPHSGHYRPTPENFQDLISFLRENDVDLND
VKLDSVDDEDDSMGKKKGVYFRDNASDDEIAQKDGPEIASEDSTSEKNELKEQATMPAAS
PHNKLRSSHSFSNRLANLKIPSHDDLLESLKNDNEAVKLESPTDGYESAEEQESKEETIA
QECILQRINSHKEMKSFQLGKQLSCKWSTGAGPRIGCLRDYPSQLQSHALEEVNLSPRSA
RRLNFYSRPSTPTSFSREMQEPFLHSPHDSRRHSSPFCKGL

Transcript Sequence

Gene sequence data has not been registered.